Mass spectrometry and bioinformatics analysis data

Mass spectrometry and bioinformatics analysis data

2DE and 2D-DIGE based proteomics analysis of serum from women with endometriosis revealed several proteins to be dysregulated. A complete list of these proteins along with their mass spectrometry data and subsequent bioinformatics analysis are presented here. The data is related to "Investigation of serum proteome alterations in human endometriosis" by Dutta et al. [1].

Improved Neuropeptide Identification Bioinformatics and Mass Spectrometry

List of papers This thesis is based on the papers listed below, which are referred to in the text by Roman numerals I-V. Neuropeptidomics: MS applied to the discovery of novel peptides from the brain. An automated method for scanning LC-MS data sets for significant peptides and proteins, including quantitative profiling and interactive confirmation. Striatal proteomic analysis suggests that fir...

Data analysis and bioinformatics tools for tandem mass spectrometry in proteomics.

Data processing is a central and critical component of a successful proteomics experiment, and is often the most time-consuming step. There have been considerable advances in the field of proteomics informatics in the past 5 years, spurred mainly by free and open-source software tools. Along with the gains afforded by new software, the benefits of making raw data and processed results freely av...

Bioinformatics methods and applications for functional analysis of mass spectrometry based proteomics data

Improved bioinformatics tools for the analysis of mass spectrometry-based peptidomics and proteomics data

..................................................................................................... ii Declaration ..................................................................................................... iv Preface ..................................................................................................... vi Acknowledgements ................................................